CDS

Accession Number TCMCG081C37319
gbkey CDS
Protein Id XP_019073025.1
Location complement(join(6732192..6732426,6732527..6732642,6733278..6733315,6733396..6733427,6733769..6733854,6733947..6734000,6734099..6734160,6734575..6734636,6734942..6735031,6735126..6735202,6735939..6735997,6736121..6736185,6736310..6736399,6736508..6736604,6736914..6737013,6737101..6737174,6738774..6738855,6738956..6739006,6739331..6739408,6739784..6739828,6739928..6740029,6740555..6740611,6741644..6741730,6742000..6742057,6742144..6742175,6742248..6742275,6742346..6742447,6742723..6742877,6744432..6744495,6745133..6745173))
Gene LOC100252044
GeneID 100252044
Organism Vitis vinifera

Protein

Length 772aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_019217480.1
Definition PREDICTED: DNA mismatch repair protein MSH5 isoform X9 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAAAGTTCAATATTCAGCTATGAGCAAGCATGGCACAGACTGATTTACCTTAGAGTAACTGGGATGGACGATGGATTAAACATCAAGGAGAGAATTTGTTTTCTGAGTTCTATGATGGATATTGGAAGTGACATTCAAGTTCGTGCAAGTGGGGGCCTTCTTGCCATATTGGAGAATGAGAGGATTGTTGATACCCTTGAGCAAAAGGAATGTGGGAATGCATCAATTACAATTGATTTTGTCACAGAAATTTCATTACACAAATTTCTCAAACTTGATGCAGCAGCTCACGAGGCCTTGCAGATTTTCCAAATAGACAAACACCCAAGCCATATGGGCATTGGTAGAGCAAAAGAAGGGTTCTCTGTGTTTGGAATGATGAATAAGTGTGTAACACCAATGGGTAGACGTCTATTAAGAAACTGGTTCTTGCGGCCTATACTAGACCTTGAAAACTTGAACAGTCGTCTAAATGCTATATCATTCTTCCTTTGTTCTGAAGAATTGACAGTTTCTTTACGAGAAACACTGAAGTCTGTAAAGGATATTCCCTATATATTGAAGAAATTCAACTCCCCAAGCTCCATATGCACAAGCACTGACTGGGCATCCTTTTTGAAGAGTGTTTGTTCACTCTTGCATGTGAACAAGATATTTGAAGTAGGCATTTCAGAAAGTCTTCAAGAGCAAGTGAAGTATTTGAATTTGGACATTGTTGAAAAGGCTCATTCATGCATTACAACAGAGTTGGCTTATGTCTATGAATTGGTAATTGGTGTTATTGATGTGAACAGAAGTAAAGAGAAGGGTTATGGAACACTAGTGAAAGAGGGTTTTTGTGATGAGTTGGATGAGCTAAGGCAAATATATGAAGAATTGCCAGAATTTCTGGAAGAGGTGTCATCATTAGAACTTGCACGACTTCCTCATTTTTGCGGAGGCAAGCTTGTTCCCTGTATTGTTTATATACACCAAATAGGATACTTGATGTGCATTTTTGAAGACAAACTTGATGAAACTACACTAGAAAAACTTCAAGATTTTGAATTTGCATTCTCAGATGGGGATGGAGATACAAAAAAATTCTTCTACCGCACCTCAAAGACGCGAGAATTGGACAACCTACTTGGAGATATATATCATAAAATTCTAGACATGGAGAGGGCAATTACTAGAGACTTGGTGTCACATATACTCCTATTCTCAATGCATTTGCTCAAGGCAGTGAGCTTTGCTGCTGAACTTGATTGCTTTTTGTCATTATCATTGATTGCTCATCAGAACAACTATGTGAGGCCTGTTTTGAGTGCAGATTCATTACTTGATATACGAAATGGAAGACATGTTTTGCAGGAAATGACAGTAGACACATTCATTCCCAATGATACAAAGATTCTTGATGATGGAAGAATTAATATCATCACTGGTCCCAATTATTCAGGGAAGAGCGTCTACATAAAGCAGGTGGCTTTAATTGTTTTCCTTTCCCATATTGGAAGTTTTGTACCAGCAGATGCTGCAACTGTGGGTTTGACAGATAGCAGGATATTTTGTGCAATGGGAAGCAAGCCTATGACTGCAGAACAATCAACATTTATGATTGATCTGCATCAAGTGGGAATGATGTTAAGGCACGCAAACTCTCGATCTTTATGTTTGCTGGATGAATTTGGTAAAGGTACTCTTACAGAAGATGGTATTGGTCTCCTTGGGGGAACTATTAATCATTTTGTTGCAAGTGATGACCCTCCAAAGGTTCTGGTTTGCACTCACTTGACTGAGATGTTCAATGAGAGTTGCTTACCAAAGTCTGAGAAAATCAGGTTTTACACCATGAGTGTGCTGAGACCTGACAACAACTGTACAGATATTGAAGATATCGTATTCCTTTATCGGCTAGTTCCTGGACATGCACTTCTTAGCTATGTTTGCATTGTGCAGGGCTGCACTGTGCACTACTTGCTGGTGTTCCAGAGGATGTTATTAAGAGAGCAGCATGTATATTGGATGCTATTGGAAATAATAAGCATGTTGAGCGTCTGTGCAACGAGAGAATATCGGCTCAGGATCAGCTGTACAAGGATGCAGTGGACAAGATGTTGGCATTTGACATTCTCAAGGGCGATCTCAACCTCTTTTTCCAAGACATCTTTCCTTCTTAATCTAAATTTGTCAAACGGTGTTATTTTCATATTTTCTCCAAGATTTTCTTGGATTGCTCTACAGCATGAGTTGGGGCATTGTTTATATCCATGCAGTGAATGGTTTAGCCATAAAGTCATGTCACTCATGCCATTCATATTTTACCCTTCATAA
Protein:  
MKSSIFSYEQAWHRLIYLRVTGMDDGLNIKERICFLSSMMDIGSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDFVTEISLHKFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLENLNSRLNAISFFLCSEELTVSLRETLKSVKDIPYILKKFNSPSSICTSTDWASFLKSVCSLLHVNKIFEVGISESLQEQVKYLNLDIVEKAHSCITTELAYVYELVIGVIDVNRSKEKGYGTLVKEGFCDELDELRQIYEELPEFLEEVSSLELARLPHFCGGKLVPCIVYIHQIGYLMCIFEDKLDETTLEKLQDFEFAFSDGDGDTKKFFYRTSKTRELDNLLGDIYHKILDMERAITRDLVSHILLFSMHLLKAVSFAAELDCFLSLSLIAHQNNYVRPVLSADSLLDIRNGRHVLQEMTVDTFIPNDTKILDDGRINIITGPNYSGKSVYIKQVALIVFLSHIGSFVPADAATVGLTDSRIFCAMGSKPMTAEQSTFMIDLHQVGMMLRHANSRSLCLLDEFGKGTLTEDGIGLLGGTINHFVASDDPPKVLVCTHLTEMFNESCLPKSEKIRFYTMSVLRPDNNCTDIEDIVFLYRLVPGHALLSYVCIVQGCTVHYLLVFQRMLLREQHVYWMLLEIISMLSVCATREYRLRISCTRMQWTRCWHLTFSRAISTSFSKTSFLLNLNLSNGVIFIFSPRFSWIALQHELGHCLYPCSEWFSHKVMSLMPFIFYPS